Single-Cell Transcriptome Analysis of Lineage Diversity and Microenvironment in High-Grade Glioma
Peter Sims
2018
2018/7/2
United States, Cabin John
Columbia University

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Single-Cell Transcriptome Analysis of Lineage Diversity and Microenvironment in High-Grade Glioma

Despite extensive molecular characterization, we lack a comprehensive picture of lineage identity, differentiation, and microenvironmental composition in high-grade gliomas (HGGs). We sampled the cellular milieu of HGGs with massively-parallel single-cell RNA-Seq. While HGG cells can resemble glia or even immature neurons and form branched lineage structures, mesenchymal transformation results in unstructured populations. Glioma cells in a subset of mesenchymal tumors lose their neural lineage identity, express inflammatory genes, and co-exist with marked myeloid infiltration, implying a molecular interaction between glioma and immune cells. Finally, we found that myeloid cells can resemble microglia, macrophages, or a hybrid state, and enrichment of these cells is predictive of poor survival.

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Homo sapiens

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